VCell Web SBPAX (pronounce: SY-Bee-Pucks) is short for Systems Biology Pathway Exchange. It is an RDF/OWL schema serving as a glue to integrate SBML/VCML-type models with BioPAX-type pathways.
- Introduction to SBPAX
- Presentation Slides: Systems Biological Pathway Exchange (SBPAX): Gluing SBML-type Models to BioPAX-type Pathways (PDF,) (presented at NCBO and Cambridge Semantic Web Gathering)
- Paper: Towards unifying systems biology - using pathway data in BioPAX format for SBML simulators (PDF,TWiki) (Accepted to q-bio, submitted to CMSB)
- Sybil, a BioPAX visualization and analyzation tool developed to support SBPAX
- sbpax.pdf: SBPAX Paper: Towards unifying systems biology - using pathway data in BioPAX format for SBML simulators
- sbpax-slides.pdf: SBPAX Presentation Slides: Systems Biology Pathway Exchange: Gluing SBML-type Models to BioPAX-type Pathways
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| I | Attachment | Action | Size | Date | Who | Comment |
|---|---|---|---|---|---|---|
 pdf | sbpax.pdf | manage | 152.5 K | 26 May 2008 - 17:02 | OliverRuebenacker | SBPAX Paper: Towards unifying systems biology - using pathway data in BioPAX format for SBML simulators |
| pdf | sbpax-slides.pdf | manage | 562.8 K | 26 May 2008 - 17:05 | OliverRuebenacker | SBPAX Presentation Slides: Systems Biology Pathway Exchange: Gluing SBML-type Models to BioPAX-type Pathways |
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